CpGPNP: an integrated analysis tool for CpG island prediction and position-based primer design
The CpGPNP is a program that predicts CpG islands and designs primer sequences based on predicted CpG island location.
The CpGPNP searches the CpG island using the sliding-window method.
And Primer sequence design programs are divided into standard PCR and bisulfite PCR programs according to bisulfite treatment.
A methylation specific PCR (MSP)program is also performed to identify the methylation of particular CpG sites.
Getting CpGPNP command-based program
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